TRiP98 OER command

 items / prefix()   list      debug
            import()   delete
            export()   display   
            read       inspect
            write
            alias()

Purpose

Parameters

items

For the input options (read and import) specifies a list of files, optionally wildcarded, to be read as OER tables.
For the output options ( write export() list inspect delete) specifies the cell type. A "*" means all types, a list of types has to be put in double quotes.
Usually OER tables have the extension .

prefix()

Specifies a file name prefix which is put in front of automatically generated file names

import()

Not yet implemented.

export(fmt)

Exports current OER table in some non-native format, at present gd is implemented to export for the gd plot program. Naming convention is:

<celltype>.oer.gd

read

Read OER table specified by items. When duplicate tissues occur, older entries are replaced by newer ones.

write

Writes the current OER table as specified by items. Naming convention is:

<celltype>.oer

list

Lists loaded OER tables specified by items.

delete

Deletes loaded OER tables specified by items.

display

Displays loaded OER tables specified by items. Not yet implemented.

inspect

Show some internal info about loaded OER tables specified by items.

alias()

Define an alias name for an OER table.

debug

Debug switch. Lots of output!

Remark

Examples

1.  $TRIP98/DATA/*.oer /read
   

   Reads all files in the directory "$TRIP98/DATA/" with the extension ".oer" and interprete them as OER tables.

2.  fishbone / alias(fonebone)
   

   Defines a dummy OER table for tissue fishbone which points to a "real" table fonebone (which must exist).